1YJ5
Molecular architecture of mammalian polynucleotide kinase, a DNA repair enzyme
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-09-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0199, 0.9793, 0.9797 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 95.473, 169.872, 77.016 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.750 - 2.800 |
R-factor | 0.22029 |
Rwork | 0.219 |
R-free | 0.25250 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.923 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 31529 | |
<I/σ(I)> | 13.1 | 2.4 |
Completeness [%] | 99.0 | 91.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 293 | 0.1M Tris (pH 8.3 - 8.7), 18-20% PEG 5000 MME, 0.1M Li2SO4, 5mM DTT, VAPOR DIFFUSION, SITTING DROP, temperature 293K |