1YI8
Crystal structure of tryptophanyl trRNA synthetase II from Deinococcus radiodurans in complex with L-Trp
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2004-03-12 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.978, 0.979, 0.92 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 211.800, 58.500, 88.900 |
Unit cell angles | 90.00, 100.72, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.100 |
R-factor | 0.26 |
Rwork | 0.260 |
R-free | 0.28000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.600 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.500 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.076 | 0.182 |
Number of reflections | 72160 | |
<I/σ(I)> | 20.4 | 2.7 |
Completeness [%] | 80.0 | 80 |
Redundancy | 2.5 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 20% PEG4K, 0.2M DiAMMONIUM HYDROGEN PHOSPHATE, VAPOR DIFFUSION, HANGING DROP, temperature 295K | |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 20% PEG4K, 0.2M DiAMMONIUM HYDROGEN PHOSPHATE, VAPOR DIFFUSION, HANGING DROP, temperature 295K | |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 20% PEG4K, 0.2M DiAMMONIUM HYDROGEN PHOSPHATE, VAPOR DIFFUSION, HANGING DROP, temperature 295K |