1YGZ
Crystal Structure of Inorganic Pyrophosphatase from Helicobacter pylori
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 6B |
Synchrotron site | PAL/PLS |
Beamline | 6B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | MACSCIENCE |
Wavelength(s) | 0.9797, 0.9799, 0.9740 |
Spacegroup name | P 3 |
Unit cell lengths | 115.055, 115.055, 73.782 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 2.600 |
Rwork | 0.206 |
R-free | 0.26500 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.240 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.058 | 0.359 |
<I/σ(I)> | 17.5 | 2.8 |
Completeness [%] | 88.1 | |
Redundancy | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 287 | MPD, imidazole, magnesium chloride, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 287K |