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1YGZ

Crystal Structure of Inorganic Pyrophosphatase from Helicobacter pylori

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 6B
Synchrotron sitePAL/PLS
Beamline6B
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMACSCIENCE
Wavelength(s)0.9797, 0.9799, 0.9740
Spacegroup nameP 3
Unit cell lengths115.055, 115.055, 73.782
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000 - 2.600
Rwork0.206
R-free0.26500
Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle1.240
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.690
High resolution limit [Å]2.6002.600
Rmerge0.0580.359
<I/σ(I)>17.52.8
Completeness [%]88.1
Redundancy3.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8287MPD, imidazole, magnesium chloride, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 287K

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PDB entries from 2024-07-17

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