Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YGF

T-to-T(high) quaternary transitions in human hemoglobin: betaH97A oxy (2MM IHP, 20% PEG) (1 test set)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]169
Detector technologyIMAGE PLATE
Collection date2001-09-18
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths96.500, 98.300, 66.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.700
R-factor0.18467
Rwork0.164
R-free0.27039
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1y5j
RMSD bond length0.026
RMSD bond angle1.730
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareX-PLOR
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.5702.920
High resolution limit [Å]2.7002.700
Rmerge0.0830.241
Number of reflections16077
<I/σ(I)>8.53
Completeness [%]90.281.6
Redundancy2.62.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
110% PEG 6000, 10 MM POTASSIUM PHOSPHATE, 100 MM POTASSIUM CHLORIDE, 3 MM SODIUM DITHIONITE, 10 MG/ML DEOXYHB, PH 7.0, BATCH, TEMPERATURE 298K, 1 ATM N2. EXPOSING DEOXY CRYSTAL TO LIGAND: A DEOXY CRYSTAL WAS SOAKED (UNDER 1 ATM NITROGEN) IN SUBSTITUTE MOTHER LIQUOR CONTAINING 20% PEG 6000, 10 MM POTASSIUM PHOSPHATE (PH 7.0), 100 MM POTASSIUM CHLORIDE, AND 2.2 MM IHP. THE IHP-STABILIZED CRYSTAL WAS THEN EXPOSED TO 1 ATM OF OXYGEN AT 177K AND DATA WAS COLLECTED AT 169K.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon