1YFO
RECEPTOR PROTEIN TYROSINE PHOSPHATASE ALPHA, DOMAIN 1 FROM MOUSE
Experimental procedure
Source type | ROTATING ANODE |
Source details | MACSCIENCE M18X |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1995-07-14 |
Detector | MACSCIENCE |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.190, 119.840, 61.180 |
Unit cell angles | 90.00, 110.08, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.250 |
R-factor | 0.184 |
Rwork | 0.184 |
R-free | 0.25100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hnp |
RMSD bond length | 0.007 |
RMSD bond angle | 24.160 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.000 | 2.350 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.046 * | 0.104 * |
Number of reflections | 22317 | |
<I/σ(I)> | 22 | 7 |
Completeness [%] | 82.4 | 17.4 |
Redundancy | 2.6 | 1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 5 | PROTEIN WAS CRYSTALLIZED FROM 12% PEG 8000 0.3 M AMMONIUM ACETATE, 50 MM SODIUM ACETATE PH 5, 2 MM DTT. ETHYLENE GLYCOL 20% WAS USED AS A CRYOPROTECTANT., pH 5.0 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15-20 (mg/ml) | |
2 | 1 | reservoir | sodium acetate | 50 (mM) | |
3 | 1 | reservoir | ammonium acetate | 0.3 (M) | |
4 | 1 | reservoir | PEG8000 | 12 (%(w/v)) |