1Y1Q
Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uridine-5p-monophosphate and Sulfate Ion at 2.35A Resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-06-19 |
Detector | MARRESEARCH |
Wavelength(s) | 0.804300 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.370, 123.730, 134.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.660 - 2.350 |
R-factor | 0.194 |
Rwork | 0.194 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sj9 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.400 |
Data scaling software | XDS |
Phasing software | MOLREP (V. 7.3) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.660 | 2.400 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.122 | 0.256 |
Number of reflections | 60846 | |
<I/σ(I)> | 9.53 | 3.23 |
Completeness [%] | 97.6 | 99.5 |
Redundancy | 4.1 | 4.14 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 295 | PEG 4000, SODIUM-ACETATE TRIHYDRATE, uridine-5p-monophosphate, ammonium sulphate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 295K |