1XM8
X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-D |
Synchrotron site | APS |
Beamline | 14-BM-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-02-14 |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 1 21 1 |
格子定数 [Å] | 68.494, 58.782, 69.049 |
格子定数 [度] | 90.00, 109.22, 90.00 |
精密化法
分解能 | 33.710 - 1.740 |
R因子 | 0.142 |
Rwork | 0.140 |
R-free | 0.18900 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.020 |
結合角の平均二乗偏差(RMSD) [度] | 1.746 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.06) |
Refinement software | REFMAC (refmac_5.2.0005) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 33.720 | 1.800 |
分解能 [Å] (高) | 1.742 | 1.740 |
Rmerge_l_obs | 0.079 | 0.545 |
独立反射数 | 51949 | |
<I/σ(I)> | 21.2 | 4.34 |
完全性 [%] | 97.4 | 92.9 |
冗長性 | 7.6 | 7.3 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | 4.5 | 293 | 10 MG/ML PROTEIN, 0.100 SODIUM ACETATE, 16 PERCENT PEG 4K, 10 PERCENT PEG 400, 0.200 GLYCINE, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 4.50 |