Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W6C

AGAO holoenzyme in a small cell, at 2.2 angstroms

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2002-03-20
DetectorMAR scanner 345 mm plate
Spacegroup nameC 1 2 1
Unit cell lengths158.041, 64.061, 69.693
Unit cell angles90.00, 111.74, 90.00
Refinement procedure
Resolution32.160 - 2.200
R-factor0.175
Rwork0.172
R-free0.21900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENRTY 1AV4
RMSD bond length0.013
RMSD bond angle1.451
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.2502.270
High resolution limit [Å]2.2002.200
Rmerge0.0500.290
Number of reflections31420
<I/σ(I)>13.683.35
Completeness [%]94.484.9
Redundancy2.21.96
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293CRYSTALS WERE GROWN IN ABOUT 2 WEEKS BY HANGING-DROP VAPOR DIFFUSION AT 293K. THE RESERVOIR WAS 0.2M MG ACETATE, 20% PEG 8K, 0.1M NA CACODYLATE PH 6.5. THE DROPS WERE 1.5MICROL OF 11.7 MG/ML PROTEIN, 0.05M HEPES, PH 7.0, PLUS 1.5MICROL OF RESERVOIR SOLUTION. A CRYSTAL WAS CRYOPROTECTED BY GRADUAL INCREMENTAL SOAKING IN RESERVOIR SOLUTION MIXED WITH GLYCEROL. THE CONCENTRATION OF GLYCEROL WAS INCREASED FROM 0 TO 30% IN 2-3% INCREMENTS DURING 2 HOURS. THE CRYSTAL WAS THEN FROZEN IN THE CRYOSTREAM.

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon