Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W54

Stepwise introduction of a zinc binding site into Porphobilinogen synthase from Pseudomonas aeruginosa (mutation D139C)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2002-03-15
DetectorRIGAKU R-AXIS IV
Spacegroup nameP 4 21 2
Unit cell lengths125.231, 125.232, 86.030
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution87.710 - 2.200
R-factor0.157
Rwork0.154
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1b4k
RMSD bond length0.026
RMSD bond angle1.928
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.1002.280
High resolution limit [Å]2.2002.200
Rmerge0.1000.450
Number of reflections35228
<I/σ(I)>23.15.3
Completeness [%]99.899.5
Redundancy12.611.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5HANGING DROP IN 24-WELL LIMBRO PLATES. DROPS MADE OF 5 MICROL PROTEIN SOLUTION (8,7 MG/ML PROTEIN, 50 MM NA-HEPES PH 7.5, 10 MM MGCL2, 10 ZNCL2, 10 MM DTT) PLUS 5 MICROL RESERVOIR SOLUTION (28,5 % (W/V) PEG-400, 100 MM NA-HEPES PH 7.5, 80MM MGCL2, 20MM DTT) ABOVE 500 MICROL OF RESERVOIR SOLUTION.

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon