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1W24

Crystal Structure Of human Vps29

Experimental procedure
Experimental methodMAD
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2004-06-18
DetectorMARRESEARCH
Spacegroup nameP 43 21 2
Unit cell lengths53.871, 53.871, 124.200
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000

*

- 2.100
R-factor0.219
Rwork0.218
R-free0.24400
Structure solution methodMAD
RMSD bond length0.009
RMSD bond angle1.180

*

Data reduction softwareAUTOMAR
Data scaling softwareMARSCALE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.180
High resolution limit [Å]2.1002.100
Rmerge0.0700.354

*

Total number of observations54013

*

Number of reflections10686

*

<I/σ(I)>4.61.5
Completeness [%]96.595.5
Redundancy4.97

*

5.05
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.525%PEG4000, 10%ETHYENE GLYCOL, 100MM HEPES PH7.5, pH 7.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400025 (%)
21reservoirethylene glycol10 (%)
31reservoirHEPES100 (mM)pH7.5
41dropprotein3 (mg/ml)
51drop50 (mM)
61dropTris-HCl5 (mM)pH7.5

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PDB entries from 2025-06-18

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