Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VSI

ASV INTEGRASE CORE DOMAIN WITH CA(II) COFACTOR

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]298
Detector technologyIMAGE PLATE
Collection date1996-09-08
DetectorRIGAKU RAXIS IIC
Spacegroup nameP 43 21 2
Unit cell lengths66.150, 66.150, 80.960
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.200
R-factor0.171

*

Rwork0.171
Structure solution methodISOSTRUCTURAL TO PDB ENTRY 1VSF
RMSD bond length0.015
RMSD bond angle0.046
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwarePROFFT
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0002.240
High resolution limit [Å]2.2002.200
Number of reflections9230
<I/σ(I)>9.13.05
Completeness [%]95.592.1
Redundancy4.13.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

7.5PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, 100 MM HEPES, PH 7.5, THEN SOAKED IN 100 MM CACL2.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400020 (%(w/v))
21reservoirHEPES100 (mM)
31reservoirisopropanol10 (%)
41dropprotein6-7.5 (mg/ml)

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon