Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VPV

Crystal structure of a degv lipid binding protein (tm1468) from thermotoga maritima at 2.45 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2003-04-03
DetectorAPS
Spacegroup nameP 41 21 2
Unit cell lengths103.256, 103.256, 115.863
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.160 - 2.450
R-factor0.18355
Rwork0.180
R-free0.25188
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mgp
RMSD bond length0.017
RMSD bond angle1.549
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.550
High resolution limit [Å]2.4532.453
Number of reflections22755
<I/σ(I)>13.774.88
Completeness [%]96.497.78
Redundancy4.093.89
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION,SITTING DROP,NANODROP6.52930.1M Cacodylate pH 6.5, 0.2M Mg(oAc)2, 27.5% PEG-8000, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon