Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VLC

Crystal structure of 3-isopropylmalate dehydrogenase (TM0556) from Thermotoga maritima at 1.90 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2004-06-27
DetectorADSC QUANTUM 315
Spacegroup nameP 3 2 1
Unit cell lengths118.780, 118.780, 56.699
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.010 - 1.900
R-factor0.18934
Rwork0.188
R-free0.21822
Structure solution methodMAD
RMSD bond length0.018
RMSD bond angle1.673
Data reduction softwareMOSFLM
Data scaling softwareSCALA (4.2))
Phasing softwareautoSHARP
Refinement softwareREFMAC (5.2.0003)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.0101.950
High resolution limit [Å]1.9001.900
Rmerge0.1100.684
Number of reflections36394
<I/σ(I)>13.61.9
Completeness [%]99.597.2
Redundancy5.63.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION,SITTING DROP,NANODROP927725.0% PEG-4000, 0.2M Li2SO4, 0.1M TRIS pH 9.0 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
1VAPOR DIFFUSION,SITTING DROP,NANODROP927725.0% PEG-4000, 0.2M Li2SO4, 0.1M TRIS pH 9.0 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
1VAPOR DIFFUSION,SITTING DROP,NANODROP927725.0% PEG-4000, 0.2M Li2SO4, 0.1M TRIS pH 9.0 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon