1VKZ
Crystal structure of Phosphoribosylamine--glycine ligase (TM1250) from Thermotoga maritima at 2.30 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-03-03 |
Detector | ADSC |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.745, 78.443, 85.018 |
Unit cell angles | 90.00, 95.06, 90.00 |
Refinement procedure
Resolution | 37.260 - 2.300 |
R-factor | 0.21572 |
Rwork | 0.213 |
R-free | 0.26383 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.491 |
Data reduction software | DENZO |
Data scaling software | SCALA (4.2)) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0000) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.400 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.054 | 0.632 |
Number of reflections | 31749 | |
<I/σ(I)> | 12.1 | 1.3 |
Completeness [%] | 85.6 | 88.2 |
Redundancy | 2 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 18% PEG-8000, 0.1M sodium cacodylate pH 6.5, 0.2M calcium acetate hydrate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 18% PEG-8000, 0.1M sodium cacodylate pH 6.5, 0.2M calcium acetate hydrate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 18% PEG-8000, 0.1M sodium cacodylate pH 6.5, 0.2M calcium acetate hydrate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |