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1VJ2

Crystal structure of a novel family of manganese-containing cupin (tm1459) from thermotoga maritima at 1.65 A resolution

Replaces:  1O5N
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2002-01-09
DetectorADSC QUANTUM 315
Spacegroup nameP 32
Unit cell lengths52.550, 52.550, 96.267
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.070 - 1.650
R-factor0.21015
Rwork0.208
R-free0.24900

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1fi2
RMSD bond length0.018
RMSD bond angle1.650

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Data reduction softwareMOSFLM
Data scaling softwareSCALA (4.2))
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1301.740
High resolution limit [Å]1.6501.650
Rmerge0.067

*

0.577

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Total number of observations124395

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Number of reflections35029
<I/σ(I)>15.61.9
Completeness [%]97.887.6
Redundancy3.62.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.9

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29350% (v/v) PEG-200, 0.1M Phosphate-citrate pH 4.2 0.2M NaCl, pH 5.2, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris20 (mM)pH7.9
21drop150 (mM)
31dropTCEP0.25 (mM)
41dropprotein10 (mg/ml)
51reservoirPEG20050 (%)
61reservoir0.2 (M)
71reservoirsodium phosphate-citrate0.1 (M)pH4.2

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PDB entries from 2024-07-17

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