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1VIS

Crystal structure of mevalonate kinase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 32-ID
Synchrotron siteAPS
Beamline32-ID
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)0.9794
Spacegroup nameP 1 21 1
Unit cell lengths56.347, 44.506, 65.880
Unit cell angles90.00, 103.09, 90.00
Refinement procedure
Resolution36.570 - 2.690
Rwork0.275
R-free0.33700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.500

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Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (4.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.5702.530
High resolution limit [Å]2.4002.400
Rmerge0.0610.034

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Number of reflections11993
<I/σ(I)>8.62.1
Completeness [%]95.281.7
Redundancy2.72
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.5

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropHEPES10 (mM)pH7.5
21drop150 (mM)
31dropmethionine10 (mM)
41dropglycerol10 (%)
51dropdithiothreitol5 (mM)
61dropprotein10 (mg/ml)

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PDB entries from 2024-09-04

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