1VCP
SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM I)
Experimental procedure
| Detector technology | AREA DETECTOR |
| Detector | SIEMENS |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.140, 176.220, 40.210 |
| Unit cell angles | 90.00, 110.36, 90.00 |
Refinement procedure
| Resolution | 6.000 - 3.000 |
| R-factor | 0.157 |
| Rwork | 0.157 |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.700 |
| Data reduction software | XDS |
| Phasing software | X-PLOR |
| Refinement software | X-PLOR |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 10.000 * | |
| High resolution limit [Å] | 3.000 * | 3.000 * |
| Rmerge | 0.076 | 0.118 * |
| Number of reflections | 6747 | 1933 * |
| Completeness [%] | 66.0 | 44.3 * |
| Redundancy | 2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 8.3 * | KHGI4 WAS REQUIRED TO OBTAIN BIG CRYSTALS. EACH OF THREE MONOMERS OF THE SEMLIKI FOREST VIRUS CORE PROTEIN BIND ONE MERCURY ATOM. THE HG ATOM FORMS A S-HG-S BOND WITH CYS 119 AND CYS 134. IN THE NATIVE STRUCTURE THERE IS A DISULFIDE BRIDGE BETWEEN CYS 119 AND CYS 134. THE S-HG DISTANCE WAS RESTRAINED TO 2.45 ANGSTROMS WHILE THE BOND ANGLE OF S-HG-S WAS RESTRAINED TO 180 DEGREES. |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 5 (mg/ml) | |
| 2 | 1 | drop | 5 (mM) | ||
| 3 | 1 | drop | PEG8000 | 3-5 (%(w/v)) | |
| 4 | 1 | drop | Tris-HCl | 100-150 (mM) | |
| 5 | 1 | reservoir | PEG8000 | 6-10 (%(w/v)) | |
| 6 | 1 | reservoir | Tris-HCl | 200-300 (mM) |






