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1V7R

Structure of nucleotide triphosphate pyrophosphatase from pyrococcus horikoshii OT3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B2
Synchrotron siteSPring-8
BeamlineBL26B2
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2003-11-12
DetectorRIGAKU RAXIS
Wavelength(s)1.0
Spacegroup nameC 2 2 21
Unit cell lengths79.013, 93.188, 55.621
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000

*

- 1.400
R-factor0.202
Rwork0.202
R-free0.22200

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1b78
RMSD bond length0.004

*

RMSD bond angle1.150

*

Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.450
High resolution limit [Å]1.4001.400
Rmerge0.0500.272

*

Total number of observations286969

*

Number of reflections40686

*

Completeness [%]99.8

*

100
Redundancy7.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH5.1291

*

1.6M Tris sodium citrate, pH 5.1, Microbatch, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20.4 (mg/ml)
21reservoirsodium citrate1.6 (M)pH5.1

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PDB entries from 2024-08-28

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