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1V4I

Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima F132A mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameI 4 2 2
Unit cell lengths152.106, 152.106, 64.835
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.400
Rwork0.225
R-free0.27640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1v4e
RMSD bond length0.004
RMSD bond angle0.900
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0420.456
Total number of observations124260

*

Number of reflections14500
<I/σ(I)>40.022.55
Completeness [%]95.481.7
Redundancy8.57
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Na+Hepes, lithium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTriton X-1000.1 (%)
31reservoirsodium HEPES0.1 (M)pH7.5
41reservoir1.5 (M)

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PDB entries from 2024-05-01

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