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1V4H

Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima F52A mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameI 4 2 2
Unit cell lengths152.330, 152.330, 65.288
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.800
Rwork0.219
R-free0.27450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1v4e
RMSD bond length0.004
RMSD bond angle0.965
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8002.800
Rmerge0.0560.450

*

Total number of observations89703

*

Number of reflections9680
<I/σ(I)>32.874.27
Completeness [%]99.2100
Redundancy9.27
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Na+Hepes, lithium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTriton X-1000.1 (%)
31reservoirsodium HEPES0.1 (M)pH7.5
41reservoir1.5 (M)

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PDB entries from 2025-06-11

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