Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1V3Y

The crystal structure of peptide deformylase from Thermus thermophilus HB8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
Collection date2002-04-23
DetectorMAR CCD 165 mm
Wavelength(s)1.00
Spacegroup nameP 43
Unit cell lengths62.582, 62.582, 105.271
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.800 - 1.810
R-factor0.17271
Rwork0.171
R-free0.20849
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.018
RMSD bond angle1.617
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.1.19)
Data quality characteristics
 Overall
Low resolution limit [Å]19.960
High resolution limit [Å]1.810
Number of reflections36563
Completeness [%]99.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP828820% PEG 4000, 0.1M Tris-HCl, 200MM Sodium Acetate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon