1V0Y
Phospholipase D from Streptomyces sp. strain PMF soaked with the substrate dibutyrylphosphatidylcholine.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM1A |
| Synchrotron site | ESRF |
| Beamline | BM1A |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Detector | MARRESEARCH |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 57.369, 56.462, 68.762 |
| Unit cell angles | 90.00, 93.74, 90.00 |
Refinement procedure
| Resolution | 13.710 - 1.710 |
| R-factor | 0.162 |
| Rwork | 0.160 |
| R-free | 0.20200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | BASED ON PDB ENTRY 1F0I |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.972 |
| Data reduction software | DENZO |
| Data scaling software | SCALA |
| Phasing software | CNS |
| Refinement software | REFMAC (5.1.24) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 13.710 | 1.800 |
| High resolution limit [Å] | 1.700 | 1.700 |
| Rmerge | 0.115 | 0.473 |
| Number of reflections | 45138 | |
| <I/σ(I)> | 4.5 | 2 |
| Completeness [%] | 99.2 | 92.9 |
| Redundancy | 4.9 | 4.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | 5.4 | 0.2 M NH4AC, 0.1 M CITRATE PHOSPHATE BUFFER AT PH5.4, 27.5% PEG 4000. CRYSTALS WERE THEREAFTER BACKSOAKED TWICE IN A PHOSPHATE- FREE BUFFER TO REMOVE TRACE-AMOUNTS OF PHOSPHATE., pH 5.40 |
