1V0T
Phospholipase D from Streptomyces sp. strain PMF soaked with the product glycerophosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.160, 56.940, 68.810 |
Unit cell angles | 90.00, 93.48, 90.00 |
Refinement procedure
Resolution | 69.010 - 1.530 |
R-factor | 0.157 |
Rwork | 0.156 |
R-free | 0.18800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1f0i |
RMSD bond length | 0.014 |
RMSD bond angle | 1.822 |
Data reduction software | DENZO |
Data scaling software | SCALA |
Phasing software | CNS |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.010 | 1.610 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmerge | 0.051 | 0.239 |
Number of reflections | 61938 | |
<I/σ(I)> | 8.6 | 3 |
Completeness [%] | 95.8 | 90.9 |
Redundancy | 3.4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 5.4 | 0.2 M NH4AC, 0.1 M CITRATE/ PHOSPHATE BUFFER AT PH5.4, 27.5% PEG 4000. CRYSTALS WERE THEREAFTER BACKSOAKED TWICE IN A PHOSPHATE-FREE BUFFER TO REMOVE TRACE-AMOUNTS OF PHOSPHATE., pH 5.40 |