1UJQ
Crystal structure of 2-methylisocitrate lyase (PrpB) from Salmonella enterica serovar typhimurium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-02-05 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.812, 99.086, 201.571 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.100 |
R-factor | 0.205 |
Rwork | 0.205 |
R-free | 0.23200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mum |
RMSD bond length | 0.006 |
RMSD bond angle | 1.100 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 2.170 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.061 | 0.423 * |
Total number of observations | 391895 * | |
Number of reflections | 70807 * | |
<I/σ(I)> | 15.5 | 5.2 |
Completeness [%] | 95.4 * | 97.2 * |
Redundancy | 5.5 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | Imidazole,Sodium acetate trihydrate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | imidazole | 0.1 (M) | pH6.5 |
2 | 1 | reservoir | sodium acetate trihydrate | 1.0 (M) |