1UED
Crystal Structure of OxyC a Cytochrome P450 Implicated in an Oxidative C-C Coupling Reaction During Vancomycin Biosynthesis.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.93 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.063, 99.270, 105.081 |
Unit cell angles | 90.00, 96.11, 90.00 |
Refinement procedure
Resolution | 28.800 * - 1.900 |
R-factor | 0.196 |
Rwork | 0.196 |
R-free | 0.23500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lfk |
RMSD bond length | 0.014 |
RMSD bond angle | 21.400 * |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.800 | 2.020 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.090 * | 0.318 * |
Total number of observations | 234465 * | |
Number of reflections | 65815 | |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 3.56 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 20 * | PEG 500MME, di-ammonium tartrate, DTE, K-Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | drop | 20 (mM) | ||
3 | 1 | drop | dithioerythritol | 5 (mM) | |
4 | 1 | drop | potassium HEPES | 20 (mM) | pH7.0 |
5 | 1 | reservoir | di-ammonium tartrate | 0.1 (M) | |
6 | 1 | reservoir | dithioerythritol | 5 (mM) | |
7 | 1 | reservoir | potassium HEPES | 100 (mM) | pH7.5 |
8 | 1 | reservoir | PEG550 MME | 12 (%) |