1UE3
Crystal structure of d(GCGAAAGC) containing hexaamminecobalt
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-18B |
| Synchrotron site | Photon Factory |
| Beamline | BL-18B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2002-03-06 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 0.9780 |
| Spacegroup name | P 63 2 2 |
| Unit cell lengths | 37.373, 37.373, 64.587 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 10.000 - 2.150 |
| Rwork | 0.227 |
| R-free | 0.23900 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1ue2 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.400 * |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | AMoRE |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 32.000 | 2.210 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.044 | 0.393 |
| Total number of observations | 102876 * | |
| Number of reflections | 1817 | |
| <I/σ(I)> | 6.2 | 1.9 |
| Completeness [%] | 100.0 | 100 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | magnesium chloride, spermine 4HCl, hexaamminecobalt(III) chloride, 2-methyl-2,4-pentanediol, sodium cacodylate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | magnesium chloride | ||
| 2 | 1 | 1 | spermine 4HCl | ||
| 3 | 1 | 1 | hexaamminecobalt(III) chloride | ||
| 4 | 1 | 1 | 2-methyl-2,4-pentanediol | ||
| 5 | 1 | 1 | sodium cacodylate | ||
| 6 | 1 | 2 | magnesium chloride | ||
| 7 | 1 | 2 | spermine 4HCl | ||
| 8 | 1 | 2 | hexaamminecobalt(III) chloride |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | DNA | 1.5 (mM) | |
| 2 | 1 | drop | 18 (mM) | ||
| 3 | 1 | drop | spermine 4HCl | 2.25 (mM) | |
| 4 | 1 | drop | 0.9 (mM) | ||
| 5 | 1 | drop | MPD | 4.5 (%) | |
| 6 | 1 | reservoir | MPD | 25 (%) | |
| 7 | 1 | drop | sodium cacodylate | 50 (mM) | pH7.0 |
