1UCR
Three-dimensional crystal structure of dissimilatory sulfite reductase D (DsrD)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44B2 |
Synchrotron site | SPring-8 |
Beamline | BL44B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-02 |
Detector | MARRESEARCH |
Wavelength(s) | 0.708 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.025, 64.559, 45.218 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 1.200 |
R-factor | 0.1381 |
Rwork | 0.136 |
R-free | 0.18030 |
Structure solution method | SIRAS |
RMSD bond length | 0.015 |
RMSD bond angle | 0.035 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | MLPHARE |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | |
High resolution limit [Å] | 1.200 | 1.200 * |
Rmerge | 0.060 * | 0.185 * |
Total number of observations | 565339 * | |
Number of reflections | 55639 | 8364 * |
Completeness [%] | 99.8 * | 99.8 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 5.3 | 293 | Mizuno, N., (2000) Acta Crystallogr., D56, 754. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 40-60 (mg/ml) | |
2 | 1 | drop | ammonium sulfate | 100 (%sat) | |
3 | 1 | reservoir | ammonium sulfate | 73-75 (%sat) |