1TC5
Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-11-14 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.91840 |
Spacegroup name | P 2 2 21 |
Unit cell lengths | 67.479, 67.465, 174.410 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.130 - 1.930 |
R-factor | 0.20053 |
Rwork | 0.199 |
R-free | 0.23430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SeMAD model which crystallized in a different space group (p21) |
RMSD bond length | 0.012 |
RMSD bond angle | 1.279 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.673 | 2.020 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.058 | 0.238 |
Number of reflections | 48177 | |
<I/σ(I)> | 10.2 | 2 |
Completeness [%] | 79.4 | 28.6 |
Redundancy | 3.1 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | PEG 200, MES, PEG3000, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 293K |