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1S9H

Crystal Structure of Adeno-associated virus Type 2 Rep40

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]109
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)0.9812, 0.9810, 0.9583
Spacegroup nameP 65
Unit cell lengths126.294, 126.294, 97.894
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.970 - 2.400
R-factor0.227
Rwork0.227
R-free0.29300
Structure solution methodMAD
RMSD bond length0.007
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000
High resolution limit [Å]2.4002.400
Rmerge0.373
Number of reflections35212
<I/σ(I)>16.81.42
Completeness [%]84
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5293PEG 8000, Sodium acetate, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP8.5293PEG 8000, Sodium acetate, Tris, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-11-06

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