1S0C
Crystal structure of botulinum neurotoxin type B at pH 5.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X12C |
Synchrotron site | NSLS |
Beamline | X12C |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | BRANDEIS - B1.2 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 75.580, 122.930, 95.280 |
Unit cell angles | 90.00, 112.85, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.200 |
R-factor | 0.2041 |
Rwork | 0.204 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1epw |
RMSD bond length | 0.006 |
RMSD bond angle | 1.230 |
Data reduction software | MARMAD |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.079 | 0.310 |
Total number of observations | 295339 * | |
Number of reflections | 81173 | |
<I/σ(I)> | 10.3 | |
Completeness [%] | 99.7 | 98.4 |
Redundancy | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6 * | 298 | Swaminathan, S., (2000) Acta Crystallogr., Sect.D, 56, 1024. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | reservoir | MES | 100 (mM) | pH6.0 |
3 | 1 | reservoir | PEG6000 |