Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1RTV

RmlC (dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase) crystal structure from Pseudomonas aeruginosa, apo structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsENRAF-NONIUS
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2000-05-10
DetectorMAC Science DIP-2000
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths57.833, 57.833, 161.620
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.230 - 2.500
R-factor0.23326
Rwork0.230
R-free0.28971
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1dzr
RMSD bond length0.015
RMSD bond angle1.902
Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.4002.670
High resolution limit [Å]2.5002.500
Rmerge0.0940.455
Number of reflections9710
<I/σ(I)>6.84
Completeness [%]99.294.4
Redundancy7.36.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.2M Sodium tartrate, 0.1M MOPS, 8% PEG 8000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon