1RPS
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin. Hemoglobin exposed to NO under anerobic conditions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 298 |
Detector technology | AREA DETECTOR |
Collection date | 1998-06-20 |
Detector | SDMS |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 97.000, 99.300, 66.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.150 * |
R-factor | 0.18648 |
Rwork | 0.181 |
R-free | 0.23200 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdb id 1RQ3 |
RMSD bond length | 0.022 |
RMSD bond angle | 1.630 * |
Data reduction software | SDMS |
Data scaling software | SDMS |
Phasing software | X-PLOR |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.841 | 2.270 |
High resolution limit [Å] | 2.150 * | 2.150 * |
Rmerge | 0.087 * | 0.254 * |
Total number of observations | 228410 * | |
Number of reflections | 34068 * | 5934 * |
<I/σ(I)> | 8.1 | 1.5 |
Completeness [%] | 96.9 | 85.9 * |
Redundancy | 6.7 * | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Batch method * | 7 | 298 | 10 mg/mL human hemoglobin, 10 mM potassium phosphate, 100 mM potassium chloride, 10-12% PEG 6000, 3 mM sodium dithionite (under anaerobic conditions), BATCH METHOD, temperature 298K, pH 7 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | human hemoglobin | 10 (mg/ml) | pH7.0 |
2 | 1 | 1 | potassium phosphate | 10 (mM) | |
3 | 1 | 1 | 100 (mM) | ||
4 | 1 | 1 | PEG6000 | 10-12 (%) | |
5 | 1 | 1 | sodium dithionite | 3 (mM) |