1ROW
Structure of SSP-19, an MSP-domain protein like family member in Caenorhabditis elegans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2003-10-24 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.354, 31.848, 55.577 |
Unit cell angles | 90.00, 97.67, 90.00 |
Refinement procedure
Resolution | 24.790 * - 2.200* |
R-factor | 0.219 * |
Rwork | 0.225 |
R-free | 0.28000 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Homology model (Swiss Model)based on PDB Entry 1M1S |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.300 * |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.070 |
High resolution limit [Å] | 2.200 * | 2.200 * |
Rmerge | 0.053 * | 0.087 * |
Total number of observations | 28027 * | |
Number of reflections | 8710 * | 852 * |
<I/σ(I)> | 33.9 | |
Completeness [%] | 92.4 * | 89.7 * |
Redundancy | 3.3 | 3.0 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 295 | 1.7M lithium sulfate, 0.05M Mes, 0.1M magnesium chloride, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 7 (mg/ml) | |
2 | 1 | drop | HEPES | 20 (mg/ml) | pH7.5 |
3 | 1 | drop | octyl beta-D-glucopyranoside | 0.5 (%(v/v)) | |
4 | 1 | reservoir | lithium sulfate | 1.7 (M) | |
5 | 1 | reservoir | MES | 50 (mM) | pH5.6 |
6 | 1 | reservoir | 100 (mM) |