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1RNF

X-RAY CRYSTAL STRUCTURE OF UNLIGANDED HUMAN RIBONUCLEASE 4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]298
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths32.910, 94.270, 40.750
Unit cell angles90.00, 106.97, 90.00
Refinement procedure
Resolution8.000 - 2.100
R-factor0.174
Rwork0.174
R-free0.23600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2rat
RMSD bond length0.012
RMSD bond angle1.601
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.180
High resolution limit [Å]2.1002.100
Rmerge0.099
Total number of observations57662

*

Number of reflections13467

*

<I/σ(I)>8.22.56
Completeness [%]97.794.8
Redundancy4.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.930% PEG4000, 0.1 M SODIUM CADODYLATE, PH 6.3, pH 6.9
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirPEG400015 (%(v/v))
31reservoirsodium acetate0.1 (M)

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PDB entries from 2024-08-28

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