1RJG
Structure of PPM1, a leucine carboxy methyltransferase involved in the regulation of protein phosphatase 2A activity
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2002-06-25 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.837, 74.098, 85.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.800 * - 1.870* |
R-factor | 0.18624 |
Rwork | 0.181 |
R-free | 0.26200 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PBD ENTRY 1RJD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.840 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | AMoRE |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.800 | 1.970 |
High resolution limit [Å] | 1.870 | 1.870 |
Rmerge | 0.090 * | |
Total number of observations | 71628 * | |
Number of reflections | 21568 | |
Completeness [%] | 83.2 | 85.2 |
Redundancy | 3.3 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 24% PEG 4000, 0.2M magnesium chloride, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 3 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 24 (%) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.5 |