1R11
Structure Determination of the Dimeric Endonuclease in a Pseudo-face-centerd P21 space group
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-3 |
| Synchrotron site | SSRL |
| Beamline | BL9-3 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 1998-11-06 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 52.412, 74.169, 84.855 |
| Unit cell angles | 90.00, 106.13, 90.00 |
Refinement procedure
| Resolution | 20.000 * - 2.000* |
| R-factor | 0.2369 |
| Rwork | 0.231 |
| R-free | 0.22900 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 * |
| RMSD bond angle | 1.163 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 * | |
| High resolution limit [Å] | 2.000 * | 2.000 * |
| Rmerge | 0.088 * | 0.352 * |
| Number of reflections | 77465 * | |
| Completeness [%] | 90.8 * | 76.5 * |
| Redundancy | 3.89 * | 2.46 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 6.6 | 100 mM Na-cacodylic acid pH 6.5 - 6.8, 20 mM (NH4)2SO4, 300-400 mM NaCH2COOH, pH 6.6 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 60 (mg/ml) | |
| 2 | 1 | reservoir | sodium cacodylate | 100 (mM) | pH6.5-6.8 |
| 3 | 1 | reservoir | ammonium sulfate | 20 (mM) | |
| 4 | 1 | reservoir | sodium acetate | 300-400 (mM) |






