1R00
Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adenosyl-L-homocysteine (SAH)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | MAX II BEAMLINE I711 |
| Synchrotron site | MAX II |
| Beamline | I711 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2002-02-09 |
| Detector | MARRESEARCH |
| Wavelength(s) | 1.076 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 63.120, 92.130, 115.330 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.000 - 2.500 |
| R-factor | 0.218 |
| Rwork | 0.213 |
| R-free | 0.28000 |
| Structure solution method | fft |
| Starting model (for MR) | 1qzz SAM-complex |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.395 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | SOLVE |
| Refinement software | REFMAC (5.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 2.590 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.108 * | 0.252 * |
| Total number of observations | 96318 * | |
| Number of reflections | 12651 | |
| <I/σ(I)> | 10.4 | 5.6 |
| Completeness [%] | 99.8 | 99.8 |
| Redundancy | 7.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5 | 294 | PEG4000, ammonium acetate, sodium acetate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | PEG4000 | 30 (%(w/v)) | |
| 2 | 1 | reservoir | ammonium acetate | 0.1 (M) | |
| 3 | 1 | reservoir | sodium acetate | 0.2 (M) | pH5.0 |
| 4 | 1 | drop | protein | 2.2 (mg/ml) |






