1QY6
Structue of V8 Protease from Staphylococcus aureus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-18B |
| Synchrotron site | Photon Factory |
| Beamline | BL-18B |
| Temperature [K] | 300 |
| Detector technology | DIFFRACTOMETER |
| Collection date | 1998-02-24 |
| Detector | WEISSENBERG |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 62.721, 62.721, 225.876 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 10.000 - 1.900 |
| R-factor | 0.23 |
| Rwork | 0.200 |
| R-free | 0.23000 |
| Structure solution method | MAD |
| RMSD bond length | 0.010 * |
| RMSD bond angle | 1.380 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | CNS |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.000 | 1.930 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.090 | 0.410 * |
| Total number of observations | 97623 * | |
| Number of reflections | 20095 | 790 * |
| Completeness [%] | 92.0 | 76.2 * |
| Redundancy | 6.3 * | 4.7 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 293 | PEG 5000 mme, KCl, HEPES, pH 8.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 7 (mg/ml) | |
| 2 | 1 | drop | HEPES | 50 (mM) | pH8.6 |
| 3 | 1 | drop | 50 (mM) | ||
| 4 | 1 | drop | PEG5000 MME | 15 (%) | |
| 5 | 1 | reservoir | 100 (mM) | ||
| 6 | 1 | reservoir | HEPES | 100 (mM) | |
| 7 | 1 | reservoir | PEG5000 MME | 20 (%) |






