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1QY4

Crystal structure of phosphoglucose isomerase from Pyrococcus furiosus in complex with gluconate 6-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2003-07-05
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths36.000, 39.700, 74.700
Unit cell angles73.70, 78.50, 72.60
Refinement procedure
Resolution15.000 - 1.800
R-factor0.22
Rwork0.218
R-free0.26600
Structure solution methodSimple refinement
Starting model (for MR)1qxj
RMSD bond length0.016
RMSD bond angle1.720

*

Data reduction softwareCrystalClear ((MSC/RIGAKU))
Data scaling softwareCrystalClear ((MSC/RIGAKU))
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.8001.860
High resolution limit [Å]1.8001.800
Rmerge0.0560.355
Total number of observations89107

*

Number of reflections32924
<I/σ(I)>8.82.7
Completeness [%]93.590.9

*

Redundancy2.72.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.629525% PEG 4000, 0.2M ammonium acetate, 0.1 M sodium acetate pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400025 (%(w/v))
21reservoirammonium acetate0.2 (M)
31reservoirsodium acetate0.1 (M)pH5.6

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PDB entries from 2024-11-06

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