1QVV
Crystal structure of the S. cerevisiae YDR533c protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-11-29 |
Detector | MARRESEARCH |
Wavelength(s) | 1.004 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.019, 93.636, 151.738 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 * - 2.350 |
R-factor | 0.228 |
Rwork | 0.228 |
R-free | 0.28300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 23.500 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.083 * | 0.498 * |
Total number of observations | 598140 * | |
Number of reflections | 41388 | |
<I/σ(I)> | 7.9 | 1.75 |
Completeness [%] | 84.0 | 71.4 |
Redundancy | 14.5 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6.4 | 18 * | 26% PEG 4000, 50mM Na/K phosphate buffer, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 9 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 26 (%) | |
3 | 1 | reservoir | sodium potassium phosphate | 50 (mM) | pH6.4 |