1QJ5
Crystal structure of 7,8-diaminopelargonic acid synthase
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1996-10-15 |
Detector | MARRESEARCH |
Wavelength(s) | 0.8265, 0.9082, 0.9918, 1.007 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.338, 55.556, 120.884 |
Unit cell angles | 90.00, 96.97, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.800 |
Rwork | 0.175 |
R-free | 0.22600 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 0.027 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CCP4 |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.068 * | 0.305 * |
Total number of observations | 149599 * | |
Number of reflections | 67496 * | |
<I/σ(I)> | 14 | 2.8 |
Completeness [%] | 94.4 | 81.3 |
Redundancy | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.3 * | drop consists of equal volume of protein and precipitant solutions * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 21 (%) | precipitant |
3 | 1 | reservoir | 2-propanol | 12 (%) | precipitant |