Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1QHJ

X-RAY STRUCTURE OF BACTERIORHODOPSIN GROWN IN LIPIDIC CUBIC PHASES

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-3
Synchrotron siteESRF
BeamlineID14-3
Temperature [K]100
Detector technologyCCD
Collection date1998-12-01
DetectorMARRESEARCH
Spacegroup nameP 63
Unit cell lengths60.800, 60.800, 110.520
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.000 - 1.900
R-factor0.224

*

Rwork0.224
R-free0.24500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ap9
RMSD bond length0.005
RMSD bond angle17.720

*

Data reduction softwareXDS
Data scaling softwareCCP4
Phasing softwareBASED (ON PACKING CONSIDERATIONS NO SPECIAL SOFTWARE)
Refinement softwareCNS (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.0002.000
High resolution limit [Å]1.9001.900
Rmerge0.046

*

0.287

*

Total number of observations97807

*

Number of reflections17996
<I/σ(I)>9.92.6
Completeness [%]99.598.3
Redundancy5.44
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

5.620

*

Landau, E.M., (1996) Proc.Natl.Acad.Sci.USA., 93, 14532.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111sodium potassium Pi3.3 (M)
211protein3.5 (mg/ml)
311methylpentandiol0.05 (%)
411beta-octylglycopyranoside1.2 (%)

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon