1QDQ
X-RAY CRYSTAL STRUCTURE OF BOVINE CATHEPSIN B-CA074 COMPLEX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS IIC |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 73.060, 73.060, 141.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 7.000 - 2.180 |
Rwork | 0.152 |
R-free | 0.18500 * |
RMSD bond length | 0.098 |
RMSD bond angle | 25.700 * |
Phasing software | PHASES |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 2.310 | |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.067 | |
Number of reflections | 32132 | |
Completeness [%] | 82.1 | 76.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.5 | 293 | sodium phosphate, sodium citrate, pH 3.5, VAPOR DIFFUSION, HANGING DROP, temperature 20K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | reservoir | sodium citrate | 50 (mM) | |
3 | 1 | reservoir | sodium phosphate | 2 (M) |