Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1QCD

CRYSTAL STRUCTURES OF ADENINE PHOSPHORIBOSYLTRANSFERASE FROM LEISHMANIA DONOVANI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]298
Detector technologyAREA DETECTOR
Collection date1995-09-01
DetectorOTHER
Spacegroup nameP 61 2 2
Unit cell lengths64.040, 64.040, 240.530
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution18.570 - 2.480
Rwork0.174
R-free0.25000
RMSD bond length0.007
RMSD bond angle24.900

*

Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwarePHASES
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]18.600

*

High resolution limit [Å]2.480

*

Rmerge0.060

*

0.149

*

Total number of observations33527

*

Number of reflections9680

*

Completeness [%]87.2

*

50.1

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6

*

277AMMONIUM SULFATE, SODIUM CITRATE, MAGNESIUM CHLORIDE, pH 4.9, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropMES10 (mM)
31dropdithiothreitol1 (mM)
41drop5 (mM)
51reservoirammonium sulfate1.2-1.6 (M)
61reservoirsodium citrate0.1 (M)
71reservoir10 (mM)

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon