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1QAT

1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE DELTA COMPLEX WITH SAMARIUM (III) CHLORIDE

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IIC
Spacegroup nameP 1
Unit cell lengths61.600, 75.100, 86.400
Unit cell angles66.40, 85.60, 89.80
Refinement procedure
Resolution6.000 - 3.000
R-factor0.194
Rwork0.194
R-free0.26100
Structure solution methodDIFFERENCE FOURIER
Starting model (for MR)APO TRICLINIC PHOSPHOLIPASE C
RMSD bond length0.009
RMSD bond angle24.600

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.0003.110
High resolution limit [Å]3.0003.000
Rmerge0.1210.248
Number of reflections24235
<I/σ(I)>7.22.3
Completeness [%]84.973.8
Redundancy2.51.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.5used to seeding, Grobler, J.A., (1996) Protein Sci., 5, 680.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirNaMes0.1 (M)
21reservoir0.2 (M)
31reservoirglycerol20 (%)
41reservoirPEG80006-8 (%)

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PDB entries from 2024-09-04

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