Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1Q9Y

CRYSTAL STRUCTURE OF ENTEROBACTERIA PHAGE RB69 GP43 DNA POLYMERASE COMPLEXED WITH 8-OXOGUANOSINE CONTAINING DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
Collection date2002-07-18
DetectorCUSTOM-MADE
Spacegroup nameP 21 21 21
Unit cell lengths80.822, 118.565, 127.224
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.060 - 2.800
R-factor0.20726
Rwork0.204
R-free0.27067
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ig9
RMSD bond length0.016
RMSD bond angle1.865
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8002.800
Number of reflections30441
<I/σ(I)>11.0777
Completeness [%]99.9100
Redundancy4.51.84
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298PEG 350MME, Calcium chloride, Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 7.50
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 350MME
211Calcium chloride
311Tris-HCl
411H2O
512PEG 350MME
612Calcium chloride
712H2O

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon