Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1Q51

Crystal Structure of Mycobacterium tuberculosis MenB in Complex with Acetoacetyl-Coenzyme A, a Key Enzyme in Vitamin K2 Biosynthesis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X26C
Synchrotron siteNSLS
BeamlineX26C
Temperature [K]100
Detector technologyCCD
Collection date2002-11-02
DetectorADSC QUANTUM 4
Wavelength(s)1.1
Spacegroup nameP 1 21 1
Unit cell lengths90.401, 139.389, 142.041
Unit cell angles90.00, 97.31, 90.00
Refinement procedure
Resolution50.000 - 2.300
R-factor0.20369
Rwork0.202
R-free0.24300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1dub
RMSD bond length0.015
RMSD bond angle1.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCCP4
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000
High resolution limit [Å]2.300
Rmerge0.116

*

0.551

*

Total number of observations503676

*

Number of reflections146353
Completeness [%]99.7

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5295dioxane, ammonium sulfate, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirdioxane0.5-2 (%)
21reservoirammonium sulfate1.2-1.3 (M)
31reservoirMES0.1 (M)pH6.5

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon