1PZJ
Cholera Toxin B-Pentamer Complexed With Nitrophenyl Galactoside 5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-03-18 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9800 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 101.754, 65.998, 77.362 |
Unit cell angles | 90.00, 105.44, 90.00 |
Refinement procedure
Resolution | 19.690 - 1.460 |
R-factor | 0.1174 |
Rwork | 0.115 |
R-free | 0.15900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3chb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.485 |
Data reduction software | TRUNCATE |
Data scaling software | CCP4 ((TRUNCATE)) |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 99.000 | 1.510 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.048 * | 0.115 * |
Total number of observations | 274226 * | |
Number of reflections | 85036 | |
<I/σ(I)> | 19.74 | 8.601 |
Completeness [%] | 98.5 | 93.2 |
Redundancy | 3.18 | 2.46 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 42% PEG 350, 50 mM NaCl, 100 mM Tris-HCl pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG350 | 42 (%) | |
2 | 1 | reservoir | 50 (mM) | ||
3 | 1 | reservoir | Tris-HCl | 100 (mM) | pH7.5 |
4 | 1 | drop | protein | 5 (mg/ml) |