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1PR4

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-ribofuranosyl-6-methylthiopurine and Phosphate/Sulfate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date1996-10-01
DetectorADSC QUANTUM 4
Wavelength(s)0.97
Spacegroup nameP 61 2 2
Unit cell lengths121.100, 121.100, 240.100
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution6.000 - 2.400
R-factor0.233
Rwork0.230
R-free0.27200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ecp
RMSD bond length0.006

*

RMSD bond angle1.300

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]6.0002.480
High resolution limit [Å]2.4002.400
Rmerge0.056

*

Number of reflections40906

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Completeness [%]94.0

*

94
Redundancy2.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.4298citrate, ammonium sulfate, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein60 (mg/ml)
21reservoirammonium sulfate30 (%)
31reservoircitrate50 (mM)pH5.4

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PDB entries from 2024-07-17

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