Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1PFE

Echinomycin-(gcgtacgc)2 complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
Collection date2002-11-19
DetectorMARRESEARCH
Spacegroup nameP 63 2 2
Unit cell lengths39.374, 39.374, 79.734
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution21.000 - 1.100
R-factor0.146
R-free0.16800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)TROSTIN A - (GCGTACGC)2 COMPLEX
RMSD bond length0.022
RMSD bond angle0.036
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareEPMR
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]21.0001.200
High resolution limit [Å]1.1001.100
Rmerge0.0490.242
Number of reflections15164
<I/σ(I)>30.0111.48
Completeness [%]97.295.7
Redundancy14.9113.05
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
14.5LI2SO4, MGCL2, METHANOL, NAAC, SPERMINE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Li2SO4
211MgCl2
311Methanol
411NaAc
511Spermine
611H2O
712MgCl2

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon